Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012017.1 Corchorus olitorius cultivar O-4 contig12050, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7199

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
580--612
17
1.9
17
88
11
50
33
12
6
48
1.65
2140--2179
19
2.1
20
86
9
57
12
12
17
57
1.65
4878--5005
65
2.0
65
100
0
256
47
20
14
17
1.82
5982--6011
12
2.4
12
94
5
51
83
0
6
10
0.81
6908--7164
125
2.0
128
86
7
362
36
10
1
50
1.49
7086--7130
22
2.0
22
86
4
63
22
13
0
64
1.28

Tables:   1

The End!