Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012018.1 Corchorus olitorius cultivar O-4 contig12051, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14610

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
323--382
30
2.0
30
96
0
111
30
6
15
48
1.70
663--697
17
2.1
17
94
0
61
17
20
22
40
1.92
788--846
29
2.0
29
100
0
118
27
8
44
20
1.80
1974--2164
95
2.0
95
98
0
373
52
9
23
14
1.71
2760--2787
13
2.2
13
100
0
56
39
7
25
28
1.82
3351--3407
29
2.0
28
82
3
69
43
7
10
38
1.66
14101--14138
11
3.3
12
82
10
53
0
21
0
78
0.74
14109--14143
16
2.2
16
90
10
54
0
17
0
82
0.66
14099--14139
12
3.5
12
78
18
50
0
21
0
78
0.76

Tables:   1

The End!