Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012019.1 Corchorus olitorius cultivar O-4 contig12052, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17178

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
676--937
138
1.9
137
90
2
418
42
8
11
37
1.72
1707--1789
42
2.0
43
88
7
125
34
22
19
22
1.96
3283--3382
22
4.6
21
80
7
92
32
13
12
43
1.80
15664--15704
2
20.0
2
95
5
73
48
0
2
48
1.14
16758--17002
41
5.8
43
85
8
340
43
25
11
20
1.84
16758--17003
84
2.9
84
97
0
456
43
25
10
20
1.84
17112--17156
2
23.0
2
95
4
83
48
0
0
51
1.00

Tables:   1

The End!