Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012020.1 Corchorus olitorius cultivar O-4 contig12053, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21474

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1467--1500
17
2.0
17
94
0
59
35
8
17
38
1.81
4718--4820
22
4.7
23
80
9
117
38
7
10
42
1.69
4718--4820
43
2.4
44
88
1
145
38
7
10
42
1.69
7846--7870
2
12.5
2
100
0
50
48
0
0
52
1.00
8247--8310
32
2.1
30
82
5
74
32
35
21
9
1.86
9090--9179
16
5.7
16
73
10
69
33
33
21
12
1.90
12287--12345
30
2.0
29
90
3
91
5
6
28
59
1.45

Tables:   1

The End!