Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012021.1 Corchorus olitorius cultivar O-4 contig12054, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23306

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6487--6550
33
1.9
33
93
0
110
18
25
17
39
1.92
9705--9867
80
2.0
80
100
0
326
15
33
1
49
1.53
11153--11194
18
2.2
20
91
8
70
14
9
0
76
1.02
11859--11893
18
1.9
18
88
11
54
0
17
17
65
1.27
12712--12746
17
2.1
17
100
0
70
28
22
11
37
1.89
16131--16172
15
2.7
15
96
3
75
40
16
21
21
1.91

Tables:   1

The End!