Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012026.1 Corchorus olitorius cultivar O-4 contig12059, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21705

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
821--929
55
2.0
55
98
0
209
35
7
11
45
1.67
1327--1359
15
2.1
16
94
5
59
51
0
0
48
1.00
2558--2690
21
6.2
21
80
5
113
36
9
29
25
1.87
6271--6307
19
1.9
19
94
0
65
32
13
5
48
1.65
7489--7533
18
2.5
18
86
13
58
6
8
2
82
0.93
7530--7578
22
2.2
22
92
7
82
46
2
2
48
1.25
11962--12051
47
1.9
47
95
0
162
25
23
23
27
2.00
12712--12748
19
2.0
19
89
5
58
64
0
0
35
0.94
17020--17095
22
3.3
22
72
13
80
50
7
23
18
1.73
17017--17109
48
1.9
48
93
0
159
45
8
24
21
1.80

Tables:   1

The End!