Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012032.1 Corchorus olitorius cultivar O-4 contig12065, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24762

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1726--1755
13
2.2
14
94
5
53
13
6
10
70
1.34
8627--8666
19
2.1
19
90
0
62
15
5
27
52
1.63
10195--10240
24
1.9
24
95
0
83
21
36
21
19
1.95
10192--10248
24
2.3
24
75
3
69
19
33
17
29
1.95
10715--10746
2
16.0
2
100
0
64
50
0
0
50
1.00
16380--16521
24
5.9
24
92
0
221
23
35
21
19
1.96
17576--17741
39
4.3
39
85
1
217
48
14
15
22
1.80
17569--17740
77
2.2
78
87
5
251
48
13
15
22
1.80
17576--17775
77
2.6
77
81
6
192
49
14
14
22
1.79
17916--17988
36
2.0
36
97
0
137
31
17
16
34
1.93
17961--18455
170
2.9
169
88
2
753
34
17
19
27
1.95
18906--18981
35
2.2
35
83
4
91
39
25
21
14
1.91
20684--20725
12
3.5
13
84
12
54
14
19
0
66
1.25

Tables:   1

The End!