Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012034.1 Corchorus olitorius cultivar O-4 contig12067, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25151

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7651--7854
40
4.9
42
84
7
256
32
16
16
34
1.91
9841--9866
11
2.4
11
100
0
52
7
15
7
69
1.35
11060--11115
28
2.0
29
85
3
78
37
5
14
42
1.68
15406--15441
18
1.9
18
88
5
54
38
2
22
36
1.69
18489--18527
18
2.1
19
90
4
62
41
7
5
46
1.55
18870--19063
97
2.0
97
98
0
379
40
21
11
27
1.87
20318--20358
21
1.9
22
85
5
57
17
24
14
43
1.86
21161--21201
18
2.2
19
87
12
59
63
2
4
29
1.28
24101--24136
18
2.1
18
89
5
56
38
11
5
44
1.63

Tables:   1

The End!