Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012038.1 Corchorus olitorius cultivar O-4 contig12071, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15469

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1823--1874
3
17.3
3
83
0
68
0
34
7
57
1.27
12530--12573
2
21.5
2
90
4
70
47
4
0
47
1.22
12789--12869
39
2.0
40
92
2
137
50
8
3
37
1.51
12986--13378
204
1.9
201
95
1
705
35
10
8
45
1.70
13908--13977
36
1.9
36
91
0
113
60
8
10
21
1.55
15256--15365
58
1.9
58
86
3
159
33
16
14
35
1.89

Tables:   1

The End!