Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012039.1 Corchorus olitorius cultivar O-4 contig12072, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38252

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9133--9196
23
2.7
24
80
4
67
10
12
4
71
1.27
15427--15467
17
2.4
17
88
8
57
26
19
17
36
1.94
21848--21885
2
19.0
2
100
0
76
0
50
0
50
1.00
32417--32475
11
5.1
11
74
11
55
28
3
1
66
1.18
35619--35699
42
1.9
42
94
0
144
46
14
8
29
1.75
35765--35877
56
2.0
56
91
0
181
38
2
23
35
1.69
36543--36589
22
2.1
23
88
4
69
17
17
23
42
1.88

Tables:   1

The End!