Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012040.1 Corchorus olitorius cultivar O-4 contig12073, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7430

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
294--331
3
12.3
3
84
15
51
28
0
5
65
1.14
294--331
10
3.7
10
86
6
58
28
0
5
65
1.14
291--331
21
2.0
21
100
0
82
29
0
4
65
1.13
291--323
11
3.1
11
82
8
50
30
0
3
66
1.06
5492--5555
34
1.9
34
96
3
121
45
17
6
31
1.73
7313--7354
13
3.3
13
76
6
50
26
0
0
73
0.83
7314--7370
25
2.3
25
84
3
71
24
3
0
71
1.01

Tables:   1

The End!