Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012059.1 Corchorus olitorius cultivar O-4 contig12092, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13404

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3473--3527
24
2.3
23
78
9
56
7
20
5
67
1.35
4230--4260
12
2.6
12
94
0
53
90
9
0
0
0.46
4224--4260
17
2.2
17
90
0
56
89
10
0
0
0.49
4224--4248
10
2.5
10
100
0
50
92
8
0
0
0.40
5292--5322
16
1.9
16
93
0
53
35
16
16
32
1.91
7965--8037
24
3.2
24
76
11
80
56
26
2
15
1.53
8556--8605
26
1.9
26
87
0
73
46
14
12
28
1.79
10952--11059
55
2.0
54
92
1
180
33
10
17
38
1.83
11953--12024
37
2.0
37
88
2
110
18
31
13
36
1.90
11954--12034
37
2.2
36
84
6
101
18
32
12
37
1.88

Tables:   1

The End!