Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012061.1 Corchorus olitorius cultivar O-4 contig12094, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7421

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
488--702
4
56.0
4
64
17
64
25
8
0
66
1.20
511--647
19
6.9
19
68
20
75
24
10
0
64
1.24
489--726
44
5.5
44
86
7
299
25
8
0
65
1.25
512--694
84
2.2
84
88
3
280
25
8
0
66
1.19
632--731
36
2.8
35
76
15
91
26
6
1
67
1.20
771--841
33
2.2
33
82
5
81
22
7
0
70
1.11
2647--2746
27
3.7
27
91
0
155
35
28
19
18
1.94
3350--3470
22
5.5
22
69
7
61
47
9
13
30
1.73
4550--4629
22
3.5
22
91
3
124
23
21
13
41
1.89

Tables:   1

The End!