Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012068.1 Corchorus olitorius cultivar O-4 contig12101, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37354

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1056--1465
204
2.0
201
94
1
721
43
8
11
36
1.70
1539--1584
24
2.0
23
91
4
74
58
8
2
30
1.40
1575--1655
39
2.0
40
88
2
119
39
3
6
50
1.45
13159--13196
12
3.4
11
85
14
51
0
15
0
84
0.63
13173--13197
13
1.9
13
100
0
50
0
12
0
88
0.53
13159--13207
23
2.2
22
85
3
62
2
12
2
83
0.82
19621--19645
10
2.5
10
100
0
50
40
28
20
12
1.87
29054--29148
31
3.1
30
68
17
88
36
23
18
21
1.95
31892--31945
28
2.1
26
83
13
67
50
9
9
31
1.66
35398--35495
48
2.0
48
98
0
187
30
11
17
40
1.84

Tables:   1

The End!