Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012080.1 Corchorus olitorius cultivar O-4 contig12113, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35632

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
806--857
25
2.2
24
86
6
70
5
40
46
7
1.57
890--948
6
10.2
6
87
3
59
74
0
25
0
0.82
893--948
18
3.2
18
79
2
69
76
0
23
0
0.78
4429--4490
27
2.3
26
81
13
72
40
19
20
19
1.92
7736--7774
17
2.3
17
100
0
78
71
0
0
28
0.86
16096--16146
21
2.5
22
84
9
63
68
0
0
31
0.90
20612--20640
14
2.1
14
100
0
58
37
13
6
41
1.72
22513--22598
45
2.0
43
90
6
138
38
24
5
31
1.79
26978--27033
29
2.0
29
92
3
96
26
32
8
32
1.87
27577--27693
51
2.3
51
81
5
132
33
14
20
31
1.93

Tables:   1

The End!