Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012086.1 Corchorus olitorius cultivar O-4 contig12119, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22230

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2060--2113
19
2.8
20
83
11
67
1
24
0
74
0.92
2055--2104
26
1.9
26
88
8
75
2
20
0
78
0.86
2055--2126
26
2.8
25
81
12
67
1
26
0
72
0.93
2081--2119
18
2.1
19
85
4
53
0
28
0
71
0.86
3519--3568
26
1.9
26
91
0
82
54
4
2
40
1.31
6226--6264
2
19.5
2
100
0
78
51
0
0
48
1.00
12898--12926
14
2.0
15
93
6
51
55
0
3
41
1.17
15901--15926
13
2.0
13
100
0
52
38
0
15
46
1.46
18284--18334
25
2.0
25
96
0
93
31
21
3
43
1.71
18717--18797
40
2.1
39
83
6
101
30
20
19
28
1.97

Tables:   1

The End!