Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012087.1 Corchorus olitorius cultivar O-4 contig12120, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24455

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
401--443
16
2.7
16
88
0
68
30
4
11
53
1.57
3634--3842
109
1.9
111
88
5
316
40
10
9
39
1.71
7663--7742
38
2.2
36
84
6
99
6
42
35
16
1.73
13942--13966
10
2.5
10
100
0
50
36
28
8
28
1.85
18847--18887
17
2.3
19
87
8
59
56
9
0
34
1.32
23308--23347
17
2.4
17
83
4
55
5
12
7
75
1.18

Tables:   1

The End!