Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012092.1 Corchorus olitorius cultivar O-4 contig12125, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22573

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1997--2021
2
12.5
2
100
0
50
48
0
0
52
1.00
1885--2118
119
2.0
118
98
0
450
46
7
9
36
1.66
4174--5214
439
2.4
439
85
4
1349
42
16
13
26
1.86
6515--7115
22
26.7
22
69
13
269
36
9
17
36
1.82
6498--6593
43
2.2
43
83
5
113
39
12
14
33
1.84
6514--6820
113
2.7
112
81
5
314
39
9
17
34
1.82
21442--21481
15
2.6
16
92
4
64
15
10
10
65
1.48
21834--21882
24
2.1
22
85
7
62
44
4
12
38
1.61

Tables:   1

The End!