Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012096.1 Corchorus olitorius cultivar O-4 contig12129, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43387

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1490--1525
19
1.9
18
88
5
54
27
22
8
41
1.82
17331--17376
2
23.5
2
95
4
85
47
0
0
52
1.00
18545--18574
6
5.0
6
100
0
60
33
16
16
33
1.92
18535--18580
18
2.5
18
82
3
56
36
15
19
28
1.92
29259--29333
27
2.7
27
81
2
87
21
16
24
38
1.92
29641--29681
20
2.0
20
95
0
73
29
7
9
53
1.60
39474--39618
76
1.9
76
81
8
179
16
30
29
23
1.96
41990--42029
15
2.6
16
92
4
64
15
7
12
65
1.47

Tables:   1

The End!