Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012100.1 Corchorus olitorius cultivar O-4 contig12133, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35224

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9967--10009
21
2.0
21
100
0
86
18
30
23
27
1.98
12461--12491
2
15.5
2
100
0
62
51
0
0
48
1.00
17056--17122
32
2.2
31
91
5
109
19
26
11
41
1.86
17324--17360
18
2.1
18
94
0
65
21
16
8
54
1.68
21636--21664
2
14.5
2
100
0
58
48
0
0
51
1.00
21752--21785
14
2.3
15
90
5
52
11
5
23
58
1.55
23065--23165
43
2.3
44
82
1
114
37
9
11
40
1.75
23108--23165
22
2.6
22
86
5
82
41
8
12
37
1.73
26997--27021
1
25.0
1
100
0
50
0
0
0
100
0.00
29508--29533
13
2.0
13
100
0
52
53
30
0
15
1.42

Tables:   1

The End!