Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012102.1 Corchorus olitorius cultivar O-4 contig12135, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23574

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2620--2653
6
5.7
6
90
10
52
2
11
0
85
0.71
2620--2657
19
2.1
18
90
5
58
2
13
0
84
0.73
2623--2657
13
2.6
14
86
13
56
2
14
0
82
0.77
2624--2666
19
2.3
19
87
0
59
4
13
0
81
0.84
13238--13422
93
2.0
93
90
0
289
51
1
11
34
1.48
13316--13361
22
2.1
22
84
8
58
60
2
13
23
1.43
13458--13519
31
2.0
31
90
0
97
40
6
22
30
1.79
13927--13976
26
1.9
26
88
8
75
28
12
12
48
1.76
13959--14014
13
4.2
13
71
10
51
26
12
1
58
1.44
20554--20589
18
1.9
19
88
5
56
58
8
0
33
1.28
21180--21214
2
17.5
2
100
0
70
51
0
0
48
1.00
21431--21460
2
15.0
2
92
0
51
46
0
3
50
1.18

Tables:   1

The End!