Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012106.1 Corchorus olitorius cultivar O-4 contig12139, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8849

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2679--2714
13
2.7
13
95
4
63
44
8
13
33
1.74
2687--2720
13
2.8
12
91
8
52
41
5
17
35
1.74
5088--5463
64
5.9
64
86
0
421
35
13
23
27
1.92
5187--5295
36
3.2
36
63
24
101
35
14
22
26
1.93
5675--6055
51
7.5
51
93
1
649
37
10
27
25
1.88
5675--6055
101
3.8
101
95
0
663
37
10
27
25
1.88
5810--5894
28
3.2
28
66
16
81
36
11
27
24
1.90
5675--6054
203
1.9
203
94
0
679
37
10
26
25
1.88

Tables:   1

The End!