Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012108.1 Corchorus olitorius cultivar O-4 contig12141, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8360

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2707--2768
27
2.3
27
83
8
74
27
4
0
67
1.10
2735--2824
19
4.4
18
69
25
54
28
10
1
60
1.36
2713--2834
46
2.6
46
90
1
190
27
9
0
63
1.30
2717--2814
27
3.7
27
76
16
80
28
8
1
62
1.30
3467--3864
198
2.0
198
99
0
778
39
12
23
24
1.89
6743--6777
18
1.9
18
88
0
52
20
8
31
40
1.82
7711--7745
11
3.2
11
91
0
61
0
2
17
80
0.84

Tables:   1

The End!