Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012113.1 Corchorus olitorius cultivar O-4 contig12146, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26912

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
914--948
2
17.5
2
100
0
70
51
0
0
48
1.00
2997--3065
34
2.0
34
94
0
120
46
13
18
21
1.83
7663--7735
27
2.6
29
86
4
105
15
13
30
41
1.85
15315--15351
12
3.0
13
80
15
51
86
13
0
0
0.57
15317--15349
17
1.9
17
93
0
57
87
12
0
0
0.53
15630--15690
30
2.0
31
84
9
81
0
9
57
32
1.32
15678--15717
9
4.3
9
93
3
62
2
10
35
52
1.48

Tables:   1

The End!