Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012120.1 Corchorus olitorius cultivar O-4 contig12153, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28824

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--155
38
3.9
38
90
1
226
22
34
18
24
1.96
9--155
77
1.9
75
90
2
231
22
34
19
24
1.97
1883--1929
17
3.2
14
75
18
51
74
4
8
12
1.19
14310--14353
23
1.9
23
90
0
70
65
22
4
6
1.35
15571--15815
41
5.8
41
84
6
296
42
25
11
21
1.85
15571--15815
84
2.9
84
93
1
402
42
25
11
21
1.85
28354--28682
41
7.8
41
84
8
403
42
25
10
20
1.85
28354--28683
84
3.9
84
95
0
579
42
25
10
20
1.85
28792--28824
2
16.5
2
100
0
66
48
0
0
51
1.00

Tables:   1

The End!