Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012121.1 Corchorus olitorius cultivar O-4 contig12154, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33612

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6558--6656
49
2.0
49
94
0
171
36
10
21
32
1.87
7079--7118
15
2.6
16
88
4
55
15
10
12
62
1.54
10893--10932
15
2.6
16
88
4
55
15
10
12
62
1.54
11132--11263
46
2.9
46
91
0
210
34
11
31
21
1.89
11483--11535
24
2.2
24
89
0
79
18
43
3
33
1.68
17658--18048
50
7.7
50
92
1
584
28
13
27
30
1.94
18135--18328
91
2.1
91
92
0
316
39
13
19
27
1.89
18754--18850
50
1.9
50
89
4
151
35
16
18
29
1.93
19401--19458
20
3.1
19
76
9
57
17
1
12
68
1.28
23560--23621
26
2.3
26
80
2
61
25
29
6
38
1.81
25247--25398
76
2.0
76
83
7
193
17
28
28
25
1.98
30235--30276
15
2.7
15
96
3
75
66
14
7
11
1.43
31038--31063
11
2.4
11
100
0
52
69
7
15
7
1.35
33556--33610
21
2.6
21
91
0
83
10
21
50
16
1.75

Tables:   1

The End!