Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012122.1 Corchorus olitorius cultivar O-4 contig12155, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28242

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5722--5757
19
1.9
18
88
5
54
41
2
22
33
1.68
13117--13181
32
2.0
32
100
0
130
18
18
27
35
1.94
13117--13191
32
2.4
32
93
2
116
20
18
29
32
1.96
16157--16229
21
3.4
21
80
1
74
19
47
20
12
1.81
22894--22966
30
2.4
30
88
8
105
16
9
31
42
1.80
26657--26698
20
2.1
20
95
0
75
42
11
11
33
1.78

Tables:   1

The End!