Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012129.1 Corchorus olitorius cultivar O-4 contig12162, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24315

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
394--435
15
2.7
15
92
3
66
64
14
9
11
1.50
4070--4095
13
2.0
13
100
0
52
30
7
0
61
1.24
4551--5421
444
2.0
446
86
3
1227
30
14
13
41
1.84
5928--5957
6
5.0
6
100
0
60
33
50
0
16
1.46
13372--13440
34
2.0
34
97
0
129
31
17
10
40
1.83
15766--15969
72
2.8
71
78
6
205
34
17
25
23
1.96
17881--17920
19
2.0
20
95
4
73
45
5
10
40
1.60

Tables:   1

The End!