Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012135.1 Corchorus olitorius cultivar O-4 contig12168, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34108

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8994--9031
18
2.1
19
90
5
60
28
13
39
18
1.88
10344--10402
30
2.0
30
86
6
84
30
16
33
18
1.94
10446--10483
18
2.1
19
90
5
60
28
13
39
18
1.88
12938--13073
45
3.0
45
93
0
227
23
4
30
41
1.74
15494--15544
17
3.0
16
91
5
66
66
1
1
29
1.13
15510--15550
4
11.2
4
80
19
54
73
0
0
26
0.84
19230--19553
178
1.8
177
86
4
465
32
13
18
36
1.89
25133--25188
22
2.5
22
80
8
69
30
21
10
37
1.87
30989--31018
16
1.9
15
93
6
51
53
10
6
30
1.60
33655--33696
15
2.7
15
92
3
66
64
14
9
11
1.50

Tables:   1

The End!