Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012139.1 Corchorus olitorius cultivar O-4 contig12172, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29196

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2938--2967
15
2.1
15
93
6
53
63
6
16
13
1.50
3325--3374
21
2.4
21
86
6
66
14
22
48
16
1.81
6932--6973
15
2.7
15
96
3
75
66
14
7
11
1.43
14080--14121
17
2.5
17
74
14
50
14
42
7
35
1.73
18164--18279
52
2.2
50
86
7
169
43
11
14
30
1.80
18164--18310
54
2.9
51
80
12
171
42
12
15
29
1.84

Tables:   1

The End!