Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012142.1 Corchorus olitorius cultivar O-4 contig12175, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33037

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3529--3605
35
2.2
35
97
0
145
18
16
27
37
1.92
3706--3781
22
3.3
23
72
15
68
53
1
1
43
1.17
3713--3753
21
1.9
22
85
5
57
56
0
2
41
1.13
3749--3781
10
3.0
11
86
13
50
54
3
0
42
1.15
4283--4332
26
1.9
26
91
0
82
54
0
20
26
1.45
4284--4332
8
5.9
8
86
9
62
53
0
20
26
1.46
10427--10451
7
3.6
7
100
0
50
12
0
0
88
0.53
10862--10892
14
2.2
14
94
0
53
90
0
9
0
0.46
16428--16466
5
7.8
5
97
0
69
15
0
2
82
0.79
29002--29276
137
2.0
137
98
0
532
29
25
19
26
1.98

Tables:   1

The End!