Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012146.1 Corchorus olitorius cultivar O-4 contig12179, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21487

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13189--13215
13
2.1
13
100
0
54
44
14
0
40
1.46
13330--13372
19
2.3
19
80
11
52
60
2
4
32
1.30
15099--15142
12
3.8
12
81
6
63
81
0
6
11
0.86
15095--15142
23
2.1
23
96
0
87
81
0
8
10
0.88
15964--15994
15
2.1
15
93
0
53
35
25
6
32
1.82
16687--16975
143
2.0
143
98
0
560
33
12
23
30
1.91
18942--19043
51
2.0
52
81
9
120
22
23
13
40
1.90

Tables:   1

The End!