Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012150.1 Corchorus olitorius cultivar O-4 contig12183, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37285

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2238--2493
131
2.0
127
87
8
369
50
1
10
37
1.47
2246--2501
123
2.0
126
85
7
304
50
1
10
36
1.49
9037--9088
22
2.4
22
83
6
61
40
9
9
40
1.71
11870--11898
10
3.0
10
95
5
51
27
0
0
72
0.85
26240--26292
26
2.0
26
100
0
106
54
7
22
15
1.65
26821--26995
28
6.2
28
86
0
233
40
27
16
16
1.89
30743--30768
13
2.0
13
100
0
52
61
7
7
23
1.49
31572--31625
19
2.6
21
77
19
60
38
18
3
38
1.69
32204--32238
2
18.5
2
88
11
56
54
0
0
45
0.99
32204--32238
13
2.8
13
95
4
63
54
0
0
45
0.99
33229--33435
112
1.8
112
87
0
306
34
18
21
25
1.96
33387--34039
101
6.5
101
90
0
1006
28
23
20
27
1.99
33387--34008
201
3.1
201
96
0
1120
28
23
19
27
1.99
34437--35067
233
2.7
232
90
2
964
25
23
18
32
1.97
36696--37148
100
4.6
100
75
7
325
23
23
16
36
1.94

Tables:   1

The End!