Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012151.1 Corchorus olitorius cultivar O-4 contig12184, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26817

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7552--8151
100
6.0
100
91
1
897
28
22
23
25
1.99
12064--12112
25
2.0
25
91
0
80
28
34
8
28
1.86
14505--14722
109
2.0
109
97
0
409
43
15
11
30
1.81
15305--15376
31
2.3
31
75
17
78
26
4
8
61
1.43
15644--15678
13
2.8
13
91
4
54
42
0
2
54
1.15
15851--15904
16
3.4
16
82
10
58
40
40
14
3
1.64
17514--17702
31
6.1
31
79
3
132
16
22
24
35
1.95
17537--17654
63
1.9
62
80
1
137
17
19
23
38
1.93
18056--18145
44
2.0
44
93
0
153
44
10
20
25
1.82
18402--18472
37
1.9
37
91
0
115
25
7
23
43
1.79
21755--21836
6
13.8
6
93
6
141
34
15
0
50
1.45
22127--22173
25
1.9
24
91
4
76
29
10
6
53
1.60
22246--22658
204
2.0
204
92
3
681
36
10
8
44
1.69
23174--23243
36
1.9
36
91
0
113
60
7
11
21
1.55
24510--24622
58
1.9
58
89
3
174
33
20
14
31
1.92

Tables:   1

The End!