Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012154.1 Corchorus olitorius cultivar O-4 contig12187, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16273

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
809--971
77
2.1
77
93
4
276
21
14
25
38
1.91
8147--9291
329
3.5
328
80
7
1235
35
17
15
32
1.91
9965--10031
27
2.5
26
80
17
68
52
1
8
37
1.42
10435--10516
2
47.0
2
69
26
62
56
0
0
43
0.99
10438--10518
13
6.8
12
74
20
64
56
0
0
43
0.99
10436--10518
14
5.8
14
80
19
84
56
0
0
43
0.99
10434--10501
21
3.0
21
82
15
91
54
0
0
45
0.99
10435--10516
16
5.5
15
76
23
77
56
0
0
43
0.99
10440--10518
34
2.3
34
85
10
99
56
0
0
43
0.99

Tables:   1

The End!