Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012156.1 Corchorus olitorius cultivar O-4 contig12189, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30342

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6034--6111
29
2.7
30
80
13
83
25
8
15
50
1.73
6835--6888
25
2.3
24
75
12
58
66
7
12
12
1.43
12429--12454
11
2.4
11
100
0
52
69
7
15
7
1.35
14827--14874
16
3.2
15
85
14
64
60
16
8
14
1.57
18905--19183
142
2.0
141
95
0
504
30
21
15
32
1.94
19968--20052
30
2.8
29
91
7
127
21
29
20
29
1.98
22770--22954
32
5.5
32
86
5
226
22
18
24
34
1.96
26656--26749
31
3.0
31
92
0
152
18
23
27
30
1.97
26875--26935
31
2.0
31
86
0
86
22
29
24
22
1.99

Tables:   1

The End!