Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012157.1 Corchorus olitorius cultivar O-4 contig12190, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20966

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3812--3860
24
2.1
23
82
14
57
22
30
34
12
1.91
4879--4903
11
2.3
11
100
0
50
8
0
28
64
1.22
4911--4981
37
1.9
37
100
0
142
46
11
5
36
1.63
7815--7890
28
2.7
28
89
2
107
36
27
18
17
1.93
8152--8385
35
6.7
35
95
1
362
27
21
17
33
1.96
9286--9317
1
32.0
1
93
0
55
3
0
0
96
0.20
9281--9321
7
6.0
7
88
8
50
7
0
2
90
0.54
20254--20294
5
8.4
5
83
5
57
75
21
2
0
0.92

Tables:   1

The End!