Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012158.1 Corchorus olitorius cultivar O-4 contig12191, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25309

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1951--1982
11
2.8
12
86
13
50
37
6
18
37
1.76
1963--1998
19
1.9
18
88
5
54
41
2
22
33
1.68
6693--6732
21
2.0
20
95
5
71
5
55
25
15
1.60
6930--6975
21
2.1
22
88
4
67
17
50
19
13
1.78
14532--14575
21
2.0
23
83
16
58
11
38
2
47
1.52
18055--18090
18
1.9
18
88
5
54
38
2
22
36
1.69
18914--18993
21
3.8
21
93
0
133
28
16
27
27
1.97
18898--18994
42
2.3
41
87
5
140
31
15
25
26
1.96

Tables:   1

The End!