Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012161.1 Corchorus olitorius cultivar O-4 contig12194, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23569

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1355--1456
51
2.0
52
81
9
120
22
23
13
40
1.90
2140--2190
24
2.1
25
85
3
68
17
7
3
70
1.27
2986--3031
22
2.1
22
84
8
58
32
21
21
23
1.98
6525--6575
24
2.1
25
85
3
68
17
5
7
68
1.34
7607--7693
38
2.3
38
100
0
174
57
5
18
18
1.59
9244--9289
24
2.0
24
82
4
58
54
4
2
39
1.32
9342--9404
31
2.0
31
81
6
74
36
7
11
44
1.69
9675--9816
69
2.0
70
83
4
180
34
12
2
50
1.52
21045--21102
10
6.4
9
74
21
50
10
10
3
75
1.15
21051--21088
16
2.3
17
86
4
51
7
7
2
81
0.96

Tables:   1

The End!