Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012163.1 Corchorus olitorius cultivar O-4 contig12196, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6619

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
220--299
22
3.6
22
81
0
88
31
15
12
41
1.84
122--298
44
4.0
44
74
6
153
33
13
16
36
1.88
1171--1247
38
2.0
38
92
5
129
42
1
9
46
1.43
4687--4740
20
2.8
19
80
5
63
29
9
11
50
1.69
4730--4775
19
2.3
20
81
3
58
36
6
13
43
1.69
4730--4783
20
2.8
19
81
13
65
37
5
11
46
1.63
6188--6272
37
2.3
37
93
0
143
52
7
4
35
1.49

Tables:   1

The End!