Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012164.1 Corchorus olitorius cultivar O-4 contig12197, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7953

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
593--641
24
2.0
24
100
0
98
48
4
20
26
1.67
980--1054
4
18.8
4
94
0
87
9
40
0
50
1.35
2459--2515
21
2.8
20
84
7
71
38
3
8
49
1.51
3530--3574
23
2.0
23
91
8
74
22
26
20
31
1.98
3603--3684
40
2.1
38
93
6
139
48
17
12
21
1.79

Tables:   1

The End!