Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012167.1 Corchorus olitorius cultivar O-4 contig12200, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7341

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
408--501
36
2.7
35
93
3
154
17
41
38
3
1.65
473--522
24
2.1
23
89
10
75
16
42
36
6
1.72
606--653
24
1.9
26
84
16
66
77
0
8
14
0.99
3617--3652
18
2.0
18
88
0
54
11
38
44
5
1.63
3688--3767
6
12.8
6
84
5
79
78
0
20
1
0.81
3688--3767
30
2.6
30
84
6
88
78
0
20
1
0.81
3689--3779
18
5.2
17
74
12
69
76
0
19
3
0.92
3965--4021
26
2.2
26
81
6
62
35
21
8
35
1.84
5975--6133
82
1.9
82
97
0
300
39
7
13
39
1.73

Tables:   1

The End!