Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012168.1 Corchorus olitorius cultivar O-4 contig12201, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11074

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1970--2705
199
3.7
199
85
3
943
34
18
13
33
1.89
3507--3554
21
2.2
21
85
3
60
58
27
0
14
1.37
5965--6023
2
27.0
2
83
16
73
45
1
6
45
1.40
7572--7619
22
2.2
22
85
7
62
43
10
20
25
1.83
7683--7725
22
2.0
22
85
0
59
39
6
11
41
1.68
8167--8240
3
25.0
3
86
8
107
66
0
1
32
1.00
9362--9442
3
26.0
3
82
9
83
60
4
0
34
1.18

Tables:   1

The End!