Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012173.1 Corchorus olitorius cultivar O-4 contig12206, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33658

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7505--7581
20
3.7
21
75
14
79
49
1
1
48
1.17
7518--7566
22
2.2
23
85
3
64
51
2
0
46
1.12
13502--13535
8
4.1
8
88
3
50
0
2
14
82
0.79
19565--19614
21
2.4
21
82
0
55
24
38
30
8
1.84
25270--25299
6
5.0
6
91
0
51
16
3
16
63
1.44
27632--28067
39
10.9
39
84
8
497
34
14
15
36
1.88
27627--28084
81
5.7
81
83
7
542
34
14
15
35
1.88
27629--28084
123
3.8
119
85
6
587
34
14
15
35
1.87
30051--30079
8
3.6
8
100
0
58
79
10
0
10
0.94
30051--30104
16
3.3
16
77
10
56
74
11
1
12
1.16
33606--33643
2
19.5
2
89
5
51
44
0
5
50
1.24

Tables:   1

The End!