Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012176.1 Corchorus olitorius cultivar O-4 contig12209, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15125

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
380--426
22
2.1
22
84
7
60
61
2
12
23
1.42
523--584
31
2.0
31
100
0
124
38
6
25
29
1.81
3620--3662
22
2.0
22
85
0
59
23
20
32
23
1.98
3692--3733
21
2.0
21
100
0
84
19
19
38
23
1.93
3620--3804
71
2.6
71
91
0
298
20
21
27
31
1.98
3764--3804
21
2.0
21
85
0
55
21
14
34
29
1.93
3852--3896
21
2.3
19
84
7
54
31
24
6
37
1.81
4249--4359
31
3.7
30
78
8
100
43
18
7
31
1.77
9467--9526
31
1.9
31
89
0
93
36
21
20
21
1.95

Tables:   1

The End!