Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012179.1 Corchorus olitorius cultivar O-4 contig12212, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11770

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1766--1805
21
1.9
21
84
0
53
32
5
0
62
1.17
5706--5758
11
5.2
10
78
17
56
41
18
0
39
1.51
5712--5747
19
1.9
18
88
5
54
36
22
0
41
1.54
7641--7695
21
2.6
21
79
0
56
10
20
45
23
1.82
10652--10734
32
2.6
32
75
9
87
61
12
3
22
1.46
11475--11524
10
5.0
10
75
0
55
12
0
74
14
1.09
11475--11524
20
2.5
20
86
0
73
12
0
74
14
1.09

Tables:   1

The End!