Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012182.1 Corchorus olitorius cultivar O-4 contig12215, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16521

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2999--3039
20
2.0
21
90
4
66
43
14
26
14
1.84
4697--4732
2
18.0
2
100
0
72
50
0
0
50
1.00
8987--9088
51
2.0
52
81
9
120
22
23
13
40
1.90
11277--11318
15
2.7
15
92
3
66
64
14
9
11
1.50
12078--12103
11
2.4
11
100
0
52
69
7
15
7
1.35

Tables:   1

The End!