Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012187.1 Corchorus olitorius cultivar O-4 contig12220, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16589

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9211--10007
443
1.8
434
85
5
1109
41
13
15
30
1.85
10980--11012
15
2.3
15
89
5
50
3
3
3
90
0.58
11744--11783
10
4.0
10
96
0
71
42
20
10
27
1.83
12621--12667
22
2.1
22
88
7
69
0
4
8
87
0.67
12669--12747
3
25.7
3
92
5
131
64
1
2
31
1.15
13384--13576
54
3.6
54
88
4
257
38
20
19
21
1.94

Tables:   1

The End!