Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012197.1 Corchorus olitorius cultivar O-4 contig12230, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25154

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3457--3485
2
14.5
2
100
0
58
0
48
0
51
1.00
5073--5114
20
2.2
20
83
12
52
40
19
11
28
1.87
5260--5311
13
3.8
13
92
5
77
23
1
13
61
1.42
5268--5302
6
5.5
6
87
12
52
20
0
14
65
1.26
8141--8165
11
2.3
11
100
0
50
64
0
8
28
1.22
9285--9698
206
2.0
205
92
0
693
31
19
14
34
1.92
18580--18631
26
2.0
27
88
3
79
46
0
17
36
1.48
18581--18645
26
2.5
27
82
7
73
49
1
16
32
1.56
21953--21983
12
2.6
12
100
0
62
16
0
0
83
0.64

Tables:   1

The End!