Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012220.1 Corchorus olitorius cultivar O-4 contig12253, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17665

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
484--600
21
5.6
21
92
2
182
27
27
15
29
1.96
5515--5570
21
2.7
21
88
0
85
55
10
23
10
1.65
6328--6384
30
1.9
30
92
7
98
29
19
29
21
1.97
9343--9374
12
2.7
12
100
0
64
40
0
34
25
1.56
9677--9739
30
2.1
31
88
5
94
26
15
38
19
1.92
9783--9820
18
2.1
19
90
5
60
28
13
39
18
1.88
11315--11361
18
2.6
18
86
6
60
17
42
14
25
1.87
15756--15797
16
2.6
16
84
0
57
14
42
0
42
1.45
15999--16110
21
5.4
21
86
4
156
28
19
25
25
1.99
15990--16110
41
2.9
42
87
3
165
28
19
26
25
1.98

Tables:   1

The End!